STRINGSTRING
pco065449 protein (Zea mays) - STRING interaction network
"pco065449" - LOC100286359 in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pco065449LOC100286359 (307 aa)    
Predicted Functional Partners:
pco142331
Hypothetical protein LOC100191391 (676 aa)
     
0.909
GRMZM2G166767_P01
RHM1 (672 aa)
     
0.909
Zm.5448
LOC100284132 (330 aa)
   
 
  0.801
GRMZM2G382038_P01
UDP-glucuronic acid decarboxylase 6-like (349 aa)
   
 
  0.781
Zm.127751
Hypothetical protein LOC100274888 (LOC100274888), mRNA (442 aa)
   
 
  0.781
Zm.128964
Uncharacterized LOC100284107 (212 aa)
   
   
  0.777
Zm.81383
GDP-L-fucose synthase 1 (376 aa)
       
  0.771
GRMZM2G300634_P02
Annotation not available (525 aa)
       
  0.753
GRMZM2G305211_P02
Uncharacterized protein (644 aa)
   
   
  0.753
Zm.123495
Rho GTPase-activating protein 1-like (411 aa)
   
   
  0.722
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
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