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STRINGSTRING
103642838 protein (Zea mays) - STRING interaction network
"103642838" - Splicing factor Prp18 family protein in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
103642838Splicing factor Prp18 family protein (387 aa)    
Predicted Functional Partners:
AC203535.4_FGP001
CDC5 protein (925 aa)
     
 
  0.868
GRMZM2G142157_P01
Pre-mRNA-splicing factor SLU7-A (282 aa)
     
 
  0.824
GRMZM2G057026_P01
Pre-mRNA-splicing factor SLU7-A (310 aa)
     
 
  0.824
100286002
Pre-mRNA-splicing factor prp45 (609 aa)
     
 
  0.821
GRMZM2G404377_P01
MIF4G domain-containing protein / MA3 domain-containing protein (177 aa)
     
 
  0.809
103647704
annotation not available (1450 aa)
     
 
  0.796
GRMZM2G086236_P01
Coiled-coil domain-containing protein (328 aa)
     
 
  0.787
TIDP3207
Zinc finger CCCH domain-containing protein 4 (493 aa)
       
 
  0.757
IDP144
Pre-mRNA-splicing factor cwc15 (230 aa)
     
 
  0.749
umc2257
Cwf15 / Cwc15 cell cycle control family protein; Pre-mRNA-splicing factor cwc15; Uncharacterized protein (230 aa)
     
 
  0.749
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Z. mays, Zea mays, Zea mays L., Zea mays var. japonica, maize
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