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STRINGSTRING
100192592 protein (Zea mays) - STRING interaction network
"100192592" - DNA excision repair protein ERCC-1 in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
100192592DNA excision repair protein ERCC-1 (397 aa)    
Predicted Functional Partners:
rad1
DNA repair endonuclease UVH1 (1851 aa)
     
 
  0.997
103632168
annotation not available (1531 aa)
     
 
  0.987
100216934
Crossover junction endonuclease MUS81 (186 aa)
     
 
  0.967
103650756
annotation not available (450 aa)
     
 
  0.967
IDP264
Exonuclease 1 (826 aa)
     
 
  0.939
103654570
DEAD/DEAH box RNA helicase family protein (537 aa)
     
 
  0.931
GRMZM2G035068_P01
DEAD/DEAH box RNA helicase family protein (930 aa)
     
 
  0.931
GRMZM2G392172_P01
annotation not available (855 aa)
     
 
  0.928
mus1
DNA mismatch repair protein MSH2; Involved in postreplication mismatch repair. Binds specifically to DNA containing mismatched nucleotides thus providing a target for the excision repair processes characteristic of postreplication mismatch repair (By similarity) (942 aa)
     
 
  0.928
AC193754.3_FGP008
annotation not available (679 aa)
     
 
  0.928
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Z. mays, Zea mays, Zea mays L., Zea mays var. japonica, maize
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