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STRINGSTRING
cl4656_1 protein (Zea mays) - STRING interaction network
"cl4656_1" - Hydrolase, carbon-nitrogen family in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cl4656_1Hydrolase, carbon-nitrogen family; Uncharacterized protein (300 aa)    
Predicted Functional Partners:
tac931.17a
Agmatine deiminase; Uncharacterized protein (414 aa)
     
  0.994
pco081586c
Spermine synthase; Belongs to the spermidine/spermine synthase family (387 aa)
       
  0.987
100282933
Spermidine synthase 1; Uncharacterized protein ; Belongs to the spermidine/spermine synthase family (387 aa)
       
  0.984
spesyn
Spermidine synthase ; Belongs to the spermidine/spermine synthase family (389 aa)
       
  0.984
pco075678
Spermidine synthase 2; Belongs to the spermidine/spermine synthase family (318 aa)
       
  0.977
100272866
Spermidine synthase 2; Belongs to the spermidine/spermine synthase family (333 aa)
       
  0.977
100274319
Diaminopimelate decarboxylase 2 chloroplastic; Belongs to the Orn/Lys/Arg decarboxylase class-II family (412 aa)
       
  0.957
GRMZM2G052288_P01
annotation not available (487 aa)
       
  0.957
GRMZM2G001405_P01
annotation not available (418 aa)
       
  0.957
TIDP3366
Lysine-specific histone demethylase 1 (493 aa)
       
  0.937
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Z. mays, Zea mays, Zea mays L., Zea mays var. japonica, maize
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