STRINGSTRING
Zm.86464 protein (Zea mays) - STRING interaction network
"Zm.86464" - Protein SGT1 homolog At5g65490-like in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Zm.86464Protein SGT1 homolog At5g65490-like (777 aa)    
Predicted Functional Partners:
GRMZM2G131597_P01
cePP protein (LOC100283264), mRNA (399 aa)
     
      0.942
Zm.17960
Putative uncharacterized protein (211 aa)
       
      0.868
Zm.81049
pre-mRNA-processing-splicing factor 8-like (2366 aa)
     
      0.863
GRMZM2G365443_P01
Annotation not available (218 aa)
     
      0.863
GRMZM2G175804_P01
Photosystem II reaction center Psb28 protein (155 aa)
     
      0.863
GRMZM2G123705_P01
Annotation not available (49 aa)
     
      0.863
Zm.6553
pre-mRNA-processing-splicing factor 8-like (2363 aa)
     
      0.863
GRMZM2G060912_P01
Annotation not available (76 aa)
     
      0.863
GRMZM2G031886_P01
Annotation not available (490 aa)
     
      0.863
GRMZM2G025070_P01
Annotation not available (155 aa)
     
      0.863
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
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