STRINGSTRING
IDP1473 protein (Zea mays) - STRING interaction network
"IDP1473" - Hypothetical protein LOC100194211 in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
IDP1473Hypothetical protein LOC100194211 (271 aa)    
Predicted Functional Partners:
GRMZM2G405203_P01
Hypothetical protein LOC100381787 (705 aa)
       
 
  0.856
RGD2
Ragged seedling 2 (1032 aa)
           
  0.721
rdr6
RNA-dependent RNA polymerase 6 (937 aa)
           
  0.720
TUBB6
Tubulin beta-6 chain (Beta-6-tubulin); Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain (496 aa)
           
  0.720
GRMZM2G357734_P03
Uncharacterized protein (638 aa)
     
  0.706
GRMZM5G891276_P01
Uncharacterized protein (326 aa)
     
  0.700
GRMZM2G528159_P02
Annotation not available (164 aa)
     
  0.700
GRMZM2G444378_P01
Uncharacterized protein (266 aa)
     
  0.700
GRMZM2G388155_P01
Uncharacterized protein (280 aa)
     
  0.700
GRMZM2G372293_P01
Uncharacterized protein (213 aa)
     
  0.700
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
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