STRINGSTRING
PIN1b protein (Zea mays) - STRING interaction network
"PIN1b" - Putative auxin efflux carrier in Zea mays
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PIN1bPutative auxin efflux carrier ; May act as a component of the auxin efflux carrier (595 aa)    
Predicted Functional Partners:
bif2
Uncharacterized protein (460 aa)
       
 
  0.711
Zm.141496
Protein kinase PINOID-like (471 aa)
       
 
  0.654
Zm.66318
Dynamin-related protein 1A (609 aa)
       
      0.536
MPI
Subtilisin-chymotrypsin inhibitor homolog1 (73 aa)
           
  0.530
eif7
Eukaryotic translation initiation factor 4E-2 (eIF-4E-2)(eIF4E-2)(mRNA cap-binding protein)(eIF-(iso)4F 25 kDa subunit)(eIF-(iso)4F p28 subunit); Recognizes and binds the 7-methylguanosine-containing mRNA cap during an early step in the initiation of protein synthesis and facilitates ribosome binding by inducing the unwinding of the mRNAs secondary structures (216 aa)
           
  0.530
Zm.26475
Low affinity nitrate transporter (583 aa)
           
  0.521
BA1
Barren stalk1 (219 aa)
           
  0.466
ARF7
Auxin response factor 1; Auxin response factors (ARFs) are transcriptional factors that binds specifically to the DNA sequence 5’-TGTCTC-3’ found in the auxin-responsive promoter elements (AuxREs) (686 aa)
           
  0.465
Zm.84075
Auxin transporter-like protein 1 (490 aa)
     
   
  0.428
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
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