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STRINGSTRING
PIN1b protein (Zea mays) - STRING interaction network
"PIN1b" - Auxin efflux carrier component in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PIN1bAuxin efflux carrier component; May act as a component of the auxin efflux carrier (595 aa)    
Predicted Functional Partners:
bif2
annotation not available (460 aa)
       
 
  0.923
103643693
annotation not available (471 aa)
       
 
  0.881
541772
Vps51/Vps67 family (Components of vesicular transport) protein (770 aa)
       
      0.751
100285382
Boron transporter 1; Uncharacterized protein (709 aa)
       
 
  0.699
100381433
Boron transporter 1 (702 aa)
       
 
  0.699
GRMZM2G125424_P04
ABC transporter B family member 19 (1264 aa)
       
 
  0.643
103642112
ABC transporter B family member 19 (1266 aa)
       
 
  0.643
103645864
annotation not available (1266 aa)
       
 
  0.643
CCD7
Carotenoid cleavage dioxygenase (624 aa)
           
  0.636
100384057
Brachytic2; PGP1 (1379 aa)
       
 
  0.636
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Z. mays, Zea mays, Zea mays L., Zea mays var. japonica, maize
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