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fad8 protein (Zea mays) - STRING interaction network
"fad8" - Omega-3 fatty acid desaturase, chloroplastic-like in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fad8Omega-3 fatty acid desaturase, chloroplastic-like (328 aa)    
Predicted Functional Partners:
Zm.10430
Probable WRKY transcription factor 4 (497 aa)
           
  0.558
umc1162
LOC100283627 (239 aa)
           
  0.522
GRMZM2G014458_P01
Protein lava lamp-like (272 aa)
     
 
  0.513
Hb2
Hemoglobin 2 (191 aa)
   
   
  0.477
HB
Non-symbiotic hemoglobin (Hbt)(ZEAmp GLB1); May not function as an oxygen storage or transport protein, but might act as an oxygen sensor or play a role in electron transfer, possibly to a bound oxygen molecule (192 aa)
   
   
  0.477
ACC1
Acetyl-coenzyme A carboxylase (2325 aa)
           
  0.470
GRMZM5G852677_P01
Putative uncharacterized protein (404 aa)
           
  0.470
Zm.7590
Hypothetical protein LOC100193636 (2248 aa)
           
  0.470
Zm.85051
Acetyl CoA carboxylase Fragment (EC 6.4.1.2) (2325 aa)
           
  0.470
Zm.10388
LOC100193830 (pco103958), mRNA (452 aa)
   
 
0.466
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
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