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STRINGSTRING
umc2632 protein (Zea mays) - STRING interaction network
"umc2632" - Alpha-expansin 3 in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
umc2632Alpha-expansin 3 (262 aa)    
Predicted Functional Partners:
GRMZM2G178486_P01
Zinc finger, C3HC4 type family protein (115 aa)
           
  0.870
103651670
annotation not available (1133 aa)
           
  0.761
GRMZM2G177726_P01
Putative DUF26-domain receptor-like protein kinase family protein (1241 aa)
           
  0.761
103646585
annotation not available (783 aa)
           
  0.761
100281435
Protein kinase (674 aa)
           
  0.761
xet1
Xyloglucan endotransglucosylase/hydrolase; Catalyzes xyloglucan endohydrolysis (XEH) and/or endotransglycosylation (XET). Cleaves and religates xyloglucan polymers, an essential constituent of the primary cell wall, and thereby participates in cell wall construction of growing tissues; Belongs to the glycosyl hydrolase 16 family (394 aa)
     
   
  0.731
GRMZM6G708185_P01
annotation not available (250 aa)
           
  0.708
100304310
DNA helicase; Belongs to the MCM family (729 aa)
           
  0.687
HAT1
Histone acetyltransferase type B catalytic subunit; Acetylates newly synthesized histones during DNA replication. Highly specific in vitro for the non-acetylated H4 which is acetylated sequentially at ’Lys-12’ and ’Lys-5’ into a di-acetylated form (468 aa)
           
  0.686
103641528
Uncharacterized protein (774 aa)
           
  0.597
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Z. mays, Zea mays, Zea mays L., Zea mays var. japonica, maize
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