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rcp1 protein (Zea mays) - STRING interaction network
"rcp1" - GDP-mannose 4,6 dehydratase 2, mRNA in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rcp1GDP-mannose 4,6 dehydratase 2, mRNA (286 aa)    
Predicted Functional Partners:
100283867
GDP-L-fucose synthase 1 (376 aa)
 
 
  0.955
GRMZM2G077780_P01
Bifunctional fucokinase/fucose pyrophosphorylase (1061 aa)
         
  0.750
100282847
UDP-glucose 6-dehydrogenase (480 aa)
 
 
  0.746
TIDP3299
UDP-glucose 6-dehydrogenase (507 aa)
   
 
  0.665
100285497
UDP-glucose 6-dehydrogenase (481 aa)
   
 
  0.665
pco065449
Uncharacterized protein; dTDP-4-dehydrorhamnose reductase (307 aa)
   
   
  0.650
GRMZM5G878607_P01
Uncharacterized protein (407 aa)
 
     
  0.626
phi1
Glucose-6-phosphate isomerase, cytosolic ; Belongs to the GPI family (236 aa)
 
     
  0.616
gpm480
GDP-mannose 3,5-epimerase 2 isoform 1; GDP-mannose 3,5-epimerase 2 isoform 2 (371 aa)
   
 
  0.600
IDP512
GDP-mannose 35-epimerase (380 aa)
   
 
  0.600
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Z. mays, Zea mays, Zea mays L., Zea mays var. japonica, maize
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