STRINGSTRING
cl30708_1 protein (Zea mays) - STRING interaction network
"cl30708_1" - Nuclear matrix protein 1 in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cl30708_1Nuclear matrix protein 1 (328 aa)    
Predicted Functional Partners:
GRMZM2G068277_P01
AUGMIN subunit 4 (353 aa)
     
   
  0.950
GRMZM2G041878_P02
AUGMIN subunit 6 (785 aa)
           
  0.926
100191214
AUGMIN subunit 2 (264 aa)
     
   
  0.848
100277574
AUGMIN subunit 1 (310 aa)
           
  0.832
100501140
AUGMIN subunit 5 (787 aa)
           
  0.825
GRMZM2G055917_P02
AUGMIN subunit 5 (787 aa)
           
  0.825
GRMZM2G154892_P01
AUGMIN subunit 3 (617 aa)
           
  0.720
103632036
annotation not available (172 aa)
           
  0.720
AC204563.3_FGP011
annotation not available (147 aa)
           
  0.720
100304415
Splicing factor PWI domain-containing protein (901 aa)
           
  0.715
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Z. mays, Zea mays, Zea mays L., Zea mays var. japonica, maize
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