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STRINGSTRING
cl5002_1 protein (Zea mays) - STRING interaction network
"cl5002_1" - Uncharacterized protein in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cl5002_1Uncharacterized protein (860 aa)    
Predicted Functional Partners:
cl49722_1
E3 SUMO-protein ligase MMS21 (245 aa)
       
 
  0.922
100281934
Small ubiquitin-related modifier; SUMO1a protein; Ubiquitin-like protein SMT3; Uncharacterized protein (99 aa)
       
 
  0.875
SUMO1a
SUMO1a protein; Ubiquitin-like protein SMT3; Uncharacterized protein (99 aa)
       
 
  0.875
cl44238_1
Ubiquitin-conjugating enzyme E2 I ; Belongs to the ubiquitin-conjugating enzyme family (159 aa)
     
 
  0.873
103637558
annotation not available (160 aa)
     
 
  0.873
103639085
SUMO-conjugating enzyme SCE1; Putative ubiquitin-conjugating enzyme family isoform 1; Putative ubiquitin-conjugating enzyme family isoform 2 ; Belongs to the ubiquitin-conjugating enzyme family (160 aa)
     
 
  0.873
100283731
Ubiquitin-conjugating enzyme E2 I ; Belongs to the ubiquitin-conjugating enzyme family (160 aa)
     
 
  0.873
100282735
Putative ubiquitin-conjugating enzyme family; Ubiquitin-conjugating enzyme E2 I ; Belongs to the ubiquitin-conjugating enzyme family (160 aa)
     
 
  0.873
103646037
annotation not available (159 aa)
     
 
  0.873
sumo2
Ubiquitin-like protein SMT3 (110 aa)
       
 
  0.855
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Z. mays, Zea mays, Zea mays L., Zea mays var. japonica, maize
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