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STRINGSTRING
100193408 protein (Zea mays) - STRING interaction network
"100193408" - Calcium ion binding in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
100193408Calcium ion binding (398 aa)    
Predicted Functional Partners:
100304257
Rhamnogalacturonate lyase family protein (573 aa)
           
  0.698
103646933
annotation not available (829 aa)
           
  0.697
GRMZM2G451327_P01
annotation not available (160 aa)
           
  0.548
EIF6
Eukaryotic translation initiation factor 6; Binds to the 60S ribosomal subunit and prevents its association with the 40S ribosomal subunit to form the 80S initiation complex in the cytoplasm. May also be involved in ribosome biogenesis (245 aa)
           
  0.530
GRMZM2G304121_P01
Eukaryotic translation initiation factor 6 (253 aa)
           
  0.530
103650047
annotation not available (613 aa)
           
  0.467
cl41895_1b
Calcium ion binding (500 aa)
           
  0.457
100193129
Calcium ion binding (456 aa)
           
  0.457
pza00497
Growth regulator like protein (500 aa)
           
  0.457
GRMZM2G061833_P01
annotation not available (604 aa)
           
  0.457
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Z. mays, Zea mays, Zea mays L., Zea mays var. japonica, maize
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