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STRINGSTRING
cl12347_2a protein (Zea mays) - STRING interaction network
"cl12347_2a" - RNA-binding (RRM/RBD/RNP motifs) family protein in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cl12347_2aRNA-binding (RRM/RBD/RNP motifs) family protein (509 aa)    
Predicted Functional Partners:
crd101
Chromdomain-containing protein CRD101; Uncharacterized protein (380 aa)
     
 
  0.902
100194052
Proteasome assembly chaperone 2; Chaperone protein which promotes assembly of the 20S proteasome as part of a heterodimer with PSMG1 (281 aa)
       
      0.468
cl19799_1
Zn-dependent hydrolase, including glyoxylase (328 aa)
           
  0.457
100193418
RNA-binding (RRM/RBD/RNP motifs) family protein (306 aa)
       
 
  0.437
pco063886
Glycine-rich protein 2b (208 aa)
       
 
  0.434
umc1109
Cold shock protein 2 (249 aa)
       
 
  0.434
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Z. mays, Zea mays, Zea mays L., Zea mays var. japonica, maize
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