• Version:
  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
cl8740_1a protein (Zea mays) - STRING interaction network
"cl8740_1a" - Exonuclease DPD1 chloroplastic/mitochondrial in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cl8740_1aExonuclease DPD1 chloroplastic/mitochondrial (315 aa)    
Predicted Functional Partners:
100272515
Endonuclease 1 (307 aa)
           
  0.861
ereb43
annotation not available (424 aa)
     
      0.847
ereb9
Putative AP2/EREBP transcription factor superfamily protein (408 aa)
     
      0.847
100273845
Nucleotide binding (452 aa)
   
        0.844
pco081085
Periodic tryptophan protein 1 (496 aa)
     
   
  0.837
100283525
MAK16-like protein RBM13 ; Belongs to the MAK16 family (281 aa)
     
      0.820
GRMZM2G149865_P01
Methyltransferase (472 aa)
     
        0.811
100192696
Ribosome biogenesis protein WDR12 homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit (434 aa)
     
        0.801
TIDP3618
Ribosomal RNA processing Brix domain protein (322 aa)
     
   
  0.778
pco146254a
Brix domain-containing protein 2; Uncharacterized protein (322 aa)
     
   
  0.778
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Z. mays, Zea mays, Zea mays L., Zea mays var. japonica, maize
Server load: low (10%) [HD]