• Version:
  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
cl6102_1a protein (Zea mays) - STRING interaction network
"cl6102_1a" - Putative HLH DNA-binding domain superfamily protein in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cl6102_1aPutative HLH DNA-binding domain superfamily protein (611 aa)    
Predicted Functional Partners:
100274370
Protein TIFY 9 (180 aa)
     
 
  0.891
100381721
Protein TIME FOR COFFEE (1868 aa)
       
 
  0.827
103634904
Putative MYB DNA-binding domain superfamily protein (347 aa)
           
  0.764
103647359
annotation not available (915 aa)
       
 
  0.745
GRMZM2G471733_P01
RING-type E3 ubiquitin transferase; Putative ARM repeat-containing protein containing family protein (570 aa)
       
 
  0.740
100272412
Transcription factor MYB36; Putative MYB DNA-binding domain superfamily protein; Uncharacterized protein (262 aa)
       
 
  0.726
myb124
Putative MYB DNA-binding domain superfamily protein (301 aa)
       
 
  0.726
100384181
Transcription repressor MYB6; Putative MYB DNA-binding domain superfamily protein; Uncharacterized protein (249 aa)
       
 
  0.714
myb85
Transcription repressor MYB6; Putative MYB DNA-binding domain superfamily protein; Uncharacterized protein (258 aa)
       
 
  0.714
GRMZM2G423331_P01
Flavone 3’-O-methyltransferase 1; Belongs to the class I-like SAM-binding methyltransferase superfamily. Cation-independent O- methyltransferase family (247 aa)
           
  0.714
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Z. mays, Zea mays, Zea mays L., Zea mays var. japonica, maize
Server load: low (9%) [HD]