STRINGSTRING
Zm.107630 protein (Zea mays) - STRING interaction network
"Zm.107630" - Uncharacterized protein in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Zm.107630Uncharacterized protein (889 aa)    
Predicted Functional Partners:
GRMZM2G418604_P02
Hypothetical protein LOC100194141 (1107 aa)
     
  0.982
Zm.21944
Uncharacterized protein (501 aa)
     
  0.982
Zm.22414
Putative uncharacterized protein (1049 aa)
     
  0.974
AC226230.2_FGP001
Hypothetical protein LOC100384817 (1057 aa)
     
  0.974
GRMZM2G380361_P02
Regulator of nonsense transcripts UPF3-like (500 aa)
     
  0.973
Zm.19378
Regulator of nonsense transcripts UPF3-like (503 aa)
     
  0.973
GRMZM2G352959_P01
Uncharacterized protein (546 aa)
     
  0.972
AC187082.3_FGP002
Annotation not available (408 aa)
     
  0.972
GRMZM5G850607_P01
Putative translation elongation/initiation factor family protein (99 aa)
     
  0.911
GRMZM5G801457_P03
Putative uncharacterized protein (245 aa)
     
  0.911
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
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