STRINGSTRING
GATA5 protein (Zea mays) - STRING interaction network
"GATA5" - GATA transcription factor 29 in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GATA5GATA transcription factor 29 (416 aa)    
Predicted Functional Partners:
Zm.22238
Lysine-specific demethylase REF6-like (1142 aa)
       
  0.746
jmj20
Hypothetical protein LOC100381553 (1522 aa)
       
  0.746
LOC542103
SET domain protein SDG117 (1601 aa)
     
  0.733
GRMZM2G125432_P01
Uncharacterized protein (1461 aa)
     
  0.733
gata4
Hypothetical protein LOC100280196 (405 aa)
           
  0.721
C2H133
Hypothetical protein LOC100193305 (354 aa)
       
  0.696
Zm.32364
Hypothetical protein LOC100304401 (599 aa)
       
  0.696
Zm.147617
Zinc finger protein ZAT6-like (178 aa)
       
  0.696
GRMZM5G828179_P01
Uncharacterized protein (354 aa)
       
  0.696
GRMZM5G804618_P01
Zinc finger, C2H2 type family protein (LOC100284942), mRNA (225 aa)
       
  0.696
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
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