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cl50078_1 protein (Zea mays) - STRING interaction network
"cl50078_1" - Hypothetical protein LOC100191661 in Zea mays
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cl50078_1Hypothetical protein LOC100191661 (369 aa)    
Predicted Functional Partners:
umc2111
LOC100282844 (207 aa)
     
        0.787
Bk2L3
Brittle stalk-2-like protein 3 (448 aa)
     
        0.617
Zm.117944
Voltage-gated potassium channel beta subunit (328 aa)
     
        0.594
Zm.92338
Cytochrome c oxidoreductase (239 aa)
           
  0.470
TUBB4
Tubulin beta-4 chain (Beta-4-tubulin); Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain (447 aa)
     
      0.449
pco137023
Hypothetical protein LOC100383093 (392 aa)
     
        0.416
pco137705
LOC100283550 (197 aa)
     
        0.400
GRMZM2G339540_P04
Hypothetical protein LOC100279562 (685 aa)
     
        0.400
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
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