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Zm.30080 protein (Zea mays) - STRING interaction network
"Zm.30080" - Protein LATERAL ROOT PRIMORDIUM 1 in Zea mays
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Zm.30080Protein LATERAL ROOT PRIMORDIUM 1 (360 aa)    
Predicted Functional Partners:
GRMZM5G895991_P01
Hypothetical protein LOC100217081 (543 aa)
           
  0.721
IDP310
Hypothetical protein LOC100193777 (543 aa)
           
  0.721
Zm.526
Hypothetical protein LOC541826 (603 aa)
           
  0.720
iaa13
IAA5 - auxin-responsive Aux/IAA family member ; Aux/IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations (269 aa)
           
  0.601
rtcs
Rootless concerning crown and seminal lateral roots (244 aa)
           
  0.558
GRMZM2G437912_P01
Hypothetical protein LOC100193934 ; Converts the prephenate produced from the shikimate- chorismate pathway into phenylalanine (426 aa)
           
  0.528
Zm.95762
Tryptophan synthase beta chain 1 Fragment (EC 4.2.1.20)(Orange pericarp 1) (474 aa)
           
  0.528
PIP2-5
Aquaporin PIP2-5 (Plasma membrane intrinsic protein 2-5)(ZmPIP2-5)(ZmPIP2;5)(ZmPIP2a); Water channel required to facilitate the transport of water across cell membrane. Its function is impaired by Hg(2+). May play a role in water uptake from the root surface. Active as homomers. Increased activity when heteromerization with PIP1-2 (285 aa)
           
  0.524
TSB2
Tryptophan synthase beta chain 2, chloroplastic Precursor; Fragment (EC 4.2.1.20)(Orange pericarp 2); The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine (479 aa)
           
  0.487
myb48
Hypothetical protein LOC100384404 (322 aa)
           
  0.472
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
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