STRINGSTRING
JMJ13 protein (Zea mays) - STRING interaction network
"JMJ13" - Transferase, transferring glycosyl groups in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JMJ13Transferase, transferring glycosyl groups (694 aa)    
Predicted Functional Partners:
GRMZM2G078756_P01
Hypothetical protein LOC100280209 (447 aa)
     
      0.885
jmj21
Hypothetical protein LOC100280238 (1148 aa)
           
  0.721
Zm.118934
PP2A regulatory subunit TAP46 (LOC100282177), mRNA (423 aa)
       
      0.687
Zm.26925
PP2A regulatory subunit TAP46 (416 aa)
       
      0.687
GRMZM5G812921_P01
Protein binding protein (LOC100280668), mRNA (492 aa)
     
      0.641
Zm.116649
Uncharacterized protein (406 aa)
       
      0.641
pco120776
Hypothetical protein LOC100191700 (283 aa)
       
      0.581
GRMZM2G145854_P01
Hypothetical protein LOC100191453 (743 aa)
       
      0.570
GRMZM2G126038_P01
Hypothetical protein LOC100280404 (744 aa)
       
      0.570
GRMZM2G479684_P01
Histone H4 (103 aa)
         
  0.523
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
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