• Version:
  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
GRMZM2G078526_P01 protein (Zea mays) - STRING interaction network
"GRMZM2G078526_P01" - E3 ubiquitin-protein ligase RMA1 in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GRMZM2G078526_P01E3 ubiquitin-protein ligase RMA1; Ring domain containing protein; Uncharacterized protein (261 aa)    
Predicted Functional Partners:
100193229
Peroxisome assembly factor 1; Uncharacterized protein (337 aa)
     
 
  0.791
103643490
Peroxisome biogenesis protein 12; Required for peroxisome biogenesis and for PTS1- and PTS2-dependent protein import into peroxisomes (394 aa)
     
 
  0.755
100285664
E3 ubiquitin-protein ligase CCNB1IP1-like protein; DNA binding protein; Uncharacterized protein (295 aa)
           
  0.733
abp1
Auxin-binding protein 1; Receptor for the plant hormone auxin (201 aa)
       
 
  0.728
abp5
Auxin-binding protein 5 (204 aa)
       
 
  0.728
abp4
Auxin-binding protein 4; This is probably a receptor for the plant hormone auxin (210 aa)
       
 
  0.728
100382471
Protein transport protein Sec24-like CEF (1100 aa)
           
  0.687
100191299
Peroxisome biogenesis protein 7 (319 aa)
     
   
  0.656
GRMZM2G102502_P01
Peroxisome biogenesis protein 19-1; Peroxisomal biogenesis factor 19 (252 aa)
       
 
  0.628
100282867
Peroxisomal biogenesis factor 19; Uncharacterized protein (253 aa)
       
 
  0.628
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Z. mays, Zea mays, Zea mays L., Zea mays var. japonica, maize
Server load: low (13%) [HD]