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Zm.68286 protein (Zea mays) - STRING interaction network
"Zm.68286" - E3 ubiquitin-protein ligase MARCH9-like in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Zm.68286E3 ubiquitin-protein ligase MARCH9-like (177 aa)    
Predicted Functional Partners:
GRMZM5G807791_P02
Uncharacterized protein (502 aa)
     
 
  0.831
GRMZM2G110794_P01
NPL4-like protein (392 aa)
     
 
  0.828
GRMZM2G056495_P01
Hypothetical protein LOC100273080 (417 aa)
     
 
  0.828
GRMZM2G047214_P01
Hypothetical protein LOC100194136 (417 aa)
     
 
  0.828
AC205012.3_FGP002
Putative uncharacterized protein (553 aa)
     
  0.813
GRMZM2G428670_P01
Ubiquitin family protein (LOC100284492), mRNA (268 aa)
       
  0.795
MubC5
Polyubiquitin (535 aa)
       
  0.795
GRMZM2G409726_P01
Polyubiquitin (533 aa)
       
  0.795
GRMZM2G355959_P01
Uncharacterized protein (130 aa)
       
  0.795
Zm.132222
Uncharacterized LOC103647529 (185 aa)
       
  0.795
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
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