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pco123260 protein (Zea mays) - STRING interaction network
"pco123260" - Hypothetical protein LOC100273638 in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pco123260Hypothetical protein LOC100273638 (235 aa)    
Predicted Functional Partners:
GRMZM5G814985_P01
Hypothetical protein LOC100279204 (595 aa)
           
  0.547
Zm.3097
Putative RNA-dependent RNA polymerase (933 aa)
           
  0.547
GRMZM2G413853_P01
Endoribonuclease Dicer homolog 3b-like (1517 aa)
           
  0.547
Zm.26039
Uncharacterized LOC103629360 (475 aa)
           
  0.545
GRMZM2G040762_P01
Hypothetical protein LOC100381417 (1307 aa)
           
  0.545
GRMZM2G357825_P01
Probable RNA-dependent RNA polymerase SHL2 (1901 aa)
           
  0.463
GRMZM2G347931_P01
Probable RNA-dependent RNA polymerase SHL2 (1241 aa)
           
  0.463
GRMZM2G331040_P01
Uncharacterized protein (577 aa)
           
  0.463
GRMZM2G327247_P01
Uncharacterized protein (462 aa)
           
  0.463
rdr6
RNA-dependent RNA polymerase 6 (937 aa)
           
  0.463
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
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