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pco123260 protein (Zea mays) - STRING interaction network
"pco123260" - Protein DCL chloroplastic in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pco123260Protein DCL chloroplastic (235 aa)    
Predicted Functional Partners:
mop1
RNA-dependent RNA polymerase; Probably involved in the RNA silencing pathway and required for the generation of small interfering RNAs (siRNAs) (1127 aa)
           
  0.957
dcl101
Dicer-like 101; Belongs to the helicase family. Dicer subfamily (1307 aa)
           
  0.957
RGD2
Protein argonaute 7; Ragged seedling 2 ; Belongs to the argonaute family (1032 aa)
           
  0.917
dcl103
Dicer-like 103 (306 aa)
           
  0.848
GRMZM2G024466_P01
Dicer-like 103; Belongs to the helicase family. Dicer subfamily (511 aa)
           
  0.848
100279204
Dicer-like 104; Belongs to the helicase family. Dicer subfamily (595 aa)
           
  0.847
dcl102
annotation not available (1517 aa)
           
  0.847
GRMZM2G582965_P02
Glycosyl hydrolase family protein (472 aa)
     
   
  0.795
GRMZM2G124745_P01
annotation not available (246 aa)
     
   
  0.795
GRMZM2G043238_P01
Protein HASTY 1 (947 aa)
           
  0.786
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Z. mays, Zea mays, Zea mays L., Zea mays var. japonica, maize
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