STRINGSTRING
NIR protein (Zea mays) - STRING interaction network
"NIR" - Ferredoxin--nitrite reductase, chloroplastic Precursor in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NIRFerredoxin--nitrite reductase, chloroplastic Precursor; Fragment (EC 1.7.7.1) (597 aa)    
Predicted Functional Partners:
Zm.4068
Putative uncharacterized protein (381 aa)
   
  0.987
GRMZM2G059191_P01
ferredoxin--NADP reductase, leaf isozyme (369 aa)
   
  0.986
IDP808
Hypothetical protein LOC100194249 (381 aa)
   
  0.986
GRMZM2G535068_P01
Annotation not available (261 aa)
   
  0.984
GRMZM2G480134_P01
Annotation not available (184 aa)
   
  0.984
GRMZM2G411448_P01
Annotation not available (299 aa)
   
  0.984
GRMZM2G395728_P02
ferredoxin--NADP reductase, leaf isozyme, chloroplastic-like (370 aa)
   
  0.984
GRMZM2G377451_P01
Uncharacterized protein (467 aa)
   
  0.984
GRMZM2G351217_P02
Annotation not available (446 aa)
   
  0.984
GRMZM2G320305_P01
Uncharacterized protein (490 aa)
   
  0.984
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
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