STRINGSTRING
bHLH148 protein (Zea mays) - STRING interaction network
"bHLH148" - Protein SPATULA in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
bHLH148Protein SPATULA (185 aa)    
Predicted Functional Partners:
umc2762
Hypothetical protein LOC100193329 (205 aa)
           
  0.721
GRMZM2G365688_P01
Uncharacterized protein (776 aa)
           
  0.721
COL12
Hypothetical protein LOC100280341 (LOC100280341), mRNA (496 aa)
           
  0.721
MYBR52
Hypothetical protein LOC100276850 (441 aa)
           
  0.721
Zm.3355
Hypothetical protein LOC100274010 (676 aa)
           
  0.720
ZCN12
LOC100127522 (177 aa)
           
  0.569
gigz1A
Gigantea 1A (1162 aa)
           
  0.563
pco066126
COP9 signalosome complex subunit 5b (362 aa)
           
  0.528
KNOX11
Homeobox protein knotted-1-like 11 Fragment ; Probably binds to the DNA sequence 5’-TGAC-3’ (307 aa)
           
  0.524
pco105988a
Constans (428 aa)
           
  0.400
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
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