STRINGSTRING
Zm.84702 protein (Zea mays) - STRING interaction network
"Zm.84702" - Nucleic acid binding protein in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Zm.84702Nucleic acid binding protein (246 aa)    
Predicted Functional Partners:
GRMZM2G178227_P01
Hypothetical protein LOC100217051 (504 aa)
       
    0.843
GRMZM2G410393_P01
Hypothetical protein LOC100277544 (1280 aa)
       
    0.826
Zm.32975
Uncharacterized protein (1280 aa)
       
    0.826
GRMZM2G153450_P01
Hypothetical protein LOC100383254 (233 aa)
       
  0.804
GRMZM2G007590_P01
Spliceosomal protein (233 aa)
       
  0.804
GRMZM5G812921_P01
Protein binding protein (LOC100280668), mRNA (492 aa)
     
  0.799
cl6482_1b
Hypothetical protein LOC100277950 (254 aa)
       
  0.786
Zm.25420
Formate dehydrogenase 2 (507 aa)
       
    0.772
Zm.16807
Hypothetical protein LOC100272422 (1229 aa)
       
    0.772
Zm.21992
Splicing factor 3B subunit 3 (1355 aa)
       
    0.772
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
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