STRINGSTRING
hon101 protein (Zea mays) - STRING interaction network
"hon101" - Histone one in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hon101Histone one (H1) 101 (196 aa)    
Predicted Functional Partners:
DDT2
Hypothetical protein LOC100191667 (622 aa)
           
  0.720
gpm120
Hypothetical protein LOC100273593 (424 aa)
           
  0.717
dmt101
Cytosine-specific methyltransferase (EC 2.1.1.37) (1536 aa)
           
  0.566
GRMZM2G355546_P01
Uncharacterized protein (979 aa)
           
  0.530
rbap1
Nucleosome/chromatin assembly factor C (1391 aa)
           
  0.530
Zm.523
Cellulose synthase-9 (1079 aa)
           
  0.527
es1
Female gametophyte-specific protein ES1 precursor (92 aa)
           
  0.459
Zm.143114
Abscisic stress-ripening protein 3-like (106 aa)
           
  0.429
aasr5
Asr protein (104 aa)
           
  0.429
GRMZM2G163939_P01
Histone H2B ; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling (149 aa)
     
        0.407
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
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