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Zm.4901 protein (Zea mays) - STRING interaction network
"Zm.4901" - Squamosa promoter-binding-like protein 1 in Zea mays
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Zm.4901Squamosa promoter-binding-like protein 1 (861 aa)    
Predicted Functional Partners:
cl44325_1
Hypothetical protein LOC100280181 (439 aa)
           
  0.720
Zm.85762
RADIALIS (96 aa)
           
  0.720
GRMZM2G117441_P01
Hypothetical protein LOC100273614 (LOC100273614), mRNA (423 aa)
       
 
  0.665
AC197118.3_FGP005
Antigenic determinant of rec-A proteinPutative uncharacterized protein ; (424 aa)
       
 
  0.665
AO2
LOC542229 (cl1856_1), mRNA; In higher plants aldehyde oxidases (AO) appear to be homo- and heterodimeric assemblies of AO subunits with probably different physiological functions. Involved in the biosynthesis of auxin (916 aa)
           
  0.530
GRMZM2G125557_P01
Hypothetical protein LOC100192502 (131 aa)
           
  0.465
GRMZM2G178917_P01
Cyclopropane fatty acid synthase (877 aa)
           
  0.418
GRMZM2G079805_P01
Uncharacterized LOC103643302 (873 aa)
           
  0.418
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
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