STRINGSTRING
pco089793 protein (Zea mays) - STRING interaction network
"pco089793" - LOC100281836 in Zea mays
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pco089793LOC100281836 (246 aa)    
Predicted Functional Partners:
GRMZM2G012143_P01
Hypothetical protein LOC100384615 (378 aa)
       
    0.599
GRMZM2G011888_P01
Hypothetical protein LOC100277365 (347 aa)
       
    0.599
GRMZM2G367026_P01
Hypothetical protein LOC100382013 (822 aa)
   
        0.525
gpm370
Hypothetical protein LOC100274407 (1052 aa)
   
        0.525
RNC1
Chloroplast ribonuclease III domain protein ; Binds specific group II introns in chloroplasts and facilitates their splicing. Acts on both subgroup IIA and subgroup IIB introns. The substrates of the subgroup II also require the CRM domain proteins CAF1 or CAF2. Binds both single-stranded and double-stranded RNA non-specifically, but lacks endonuclease activity. Required for plastid ribosome biogenesis (525 aa)
     
        0.469
FTRC
Ferredoxin-thioredoxin reductase catalytic chain, chloroplastic Precursor (FTR-C)(EC 1.18.-.-)(Ferredoxin-thioredoxin reductase subunit B)(FTR-B); Catalytic subunit of the ferredoxin-thioredoxin reductase (FTR), which catalyzes the two-electron reduction of thioredoxins by the electrons provided by reduced ferredoxin (152 aa)
     
        0.468
GRMZM2G035338_P02
Hypothetical protein LOC100272360 (325 aa)
           
  0.455
GRMZM2G136892_P01
Annotation not available (451 aa)
         
  0.454
GRMZM2G112499_P01
Annotation not available (442 aa)
         
  0.454
GRMZM2G481222_P01
Uncharacterized protein (56 aa)
           
  0.453
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
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