Known metabolic pathways, protein complexes, signal transduction pathways, etc ... from curated databases.
Genes that are sometimes fused into single open reading frames.
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Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
colored nodes: query proteins and first shell of interactors
white nodes: second shell of interactors
empty nodes: proteins of unknown 3D structure
filled nodes: some 3D structure is known or predicted
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
from curated databases
Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5’-TGTCTC-3’ found in the auxin-responsive promoter elements (AuxREs) (897 aa)
Predicted Functional Partners:
Putative ADP-ribosylation factor GTPase-activating protein AGD14 (765 aa)
(+)-neomenthol dehydrogenase (335 aa)
Hexosyltransferase; Transferase, transferring glycosyl groups ; Belongs to the glycosyltransferase 8 family (532 aa)
Auxin-responsive protein; Aux/IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations (271 aa)
Auxin-responsive protein; Aux/IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations (269 aa)
Cytochrome P450 family 76 subfamily C polypeptide 7; Belongs to the cytochrome P450 family (432 aa)
Putative 6-phosphogluconolactonase 1 (281 aa)
annotation not available (338 aa)
Rootless concerning crown and seminal lateral roots (244 aa)
P-loop containing nucleoside triphosphate hydrolase superfamily protein (304 aa)
Your Current Organism:
NCBI taxonomy Id: 4577 Other names: Z. mays, Zea mays, Zea mays L., Zea mays var. japonica, maize