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Zm.138016 protein (Zea mays) - STRING interaction network
"Zm.138016" - D-3-phosphoglycerate dehydrogenase, chloroplastic-like in Zea mays
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Zm.138016D-3-phosphoglycerate dehydrogenase, chloroplastic-like (626 aa)    
Predicted Functional Partners:
Zm.85211
Phosphoserine aminotransferase 1 (425 aa)
   
  0.997
GRMZM2G165383_P01
Phosphoserine phosphatase (296 aa)
   
 
  0.780
GRMZM2G021270_P01
Hypothetical protein LOC100193866 ; Control of topological states of DNA by transient breakage and subsequent rejoining of DNA strands. Topoisomerase II makes double-strand breaks (1412 aa)
   
   
  0.740
GRMZM2G078756_P01
Hypothetical protein LOC100280209 (447 aa)
   
   
  0.734
pco084394
LOC100281949 (403 aa)
   
 
  0.727
GRMZM2G064988_P02
Hypothetical protein LOC100194333 (152 aa)
       
    0.694
hcp101b
Hypothetical protein LOC100381502 (175 aa)
       
    0.694
Zm.99021
Serine--glyoxylate aminotransferase-like (262 aa)
   
 
  0.686
GRMZM2G119511_P01
Uncharacterized protein (159 aa)
   
 
  0.686
GRMZM2G050481_P01
Serine--glyoxylate aminotransferase-like (290 aa)
   
 
  0.686
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
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