STRINGSTRING
Zm.141086 protein (Zea mays) - STRING interaction network
"Zm.141086" - Uncharacterized protein in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Zm.141086Uncharacterized protein (760 aa)    
Predicted Functional Partners:
Zm.24012
Hypothetical protein LOC100216878 (LOC100216878), mRNA (293 aa)
           
  0.546
GRMZM5G877815_P01
40S ribosomal protein S27a (156 aa)
         
  0.477
UBF9
Ubiquitin-40S ribosomal protein S27a Precursor [Contains Ubiquitin;40S ribosomal protein S27a]; Ubiquitin exists either covalently attached to another protein, or free (unanchored). When covalently bound, it is conjugated to target proteins via an isopeptide bond either as a monomer (monoubiquitin), a polymer linked via different Lys residues of the ubiquitin (polyubiquitin chains) or a linear polymer linked via the initiator Met of the ubiquitin (linear polyubiquitin chains). Polyubiquitin chains, when attached to a target protein, have different functions depending on the Lys residue [...] (155 aa)
         
  0.477
GRMZM2G406643_P01
Ubiquitin-like (141 aa)
         
  0.477
Zm.86935
40S ribosomal protein S27a (155 aa)
         
  0.477
pco110021
40S ribosomal protein S27a (155 aa)
         
  0.477
Zm.163255
40S ribosomal protein S27a (155 aa)
         
  0.477
Zm.137692
Uncharacterized LOC103638077 (165 aa)
         
  0.477
Zm.124974
UBiQuitin family member (143 aa)
         
  0.477
GRMZM2G472696_P01
Histone H2B ; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling (149 aa)
           
  0.459
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
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