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TIDP2716 protein (Zea mays) - STRING interaction network
"TIDP2716" - LOC100280565 in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TIDP2716LOC100280565 ; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit (122 aa)    
Predicted Functional Partners:
GRMZM2G436038_P01
Annotation not available (340 aa)
   
  0.996
GRMZM2G175755_P01
Prpl35-1 protein (143 aa)
   
  0.994
prpl35-1
Prpl35-1 protein (143 aa)
   
  0.994
cl12353_1
LOC100283825 (190 aa)
   
  0.992
Zm.97159
50S ribosomal protein L27Putative uncharacterized protein ; (146 aa)
     
  0.990
pza02939
Hypothetical protein LOC100274437 (314 aa)
   
  0.984
GRMZM2G112865_P01
LOC100284384 (161 aa)
   
  0.982
GRMZM2G108643_P01
Hypothetical protein LOC100274150 (209 aa)
   
  0.982
Zm.84814
LOC100280943 (293 aa)
   
  0.982
rpl19
Ribosomal protein L19 (213 aa)
   
  0.981
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
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