STRINGSTRING
Zm.21048 protein (Zea mays) - STRING interaction network
"Zm.21048" - Uncharacterized protein in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Zm.21048Uncharacterized protein (302 aa)    
Predicted Functional Partners:
GRMZM2G121785_P01
U3 small nucleolar RNA-associated protein 11 ; Involved in nucleolar processing of pre-18S ribosomal RNA (232 aa)
     
 
    0.993
GRMZM2G355229_P01
Uncharacterized protein (173 aa)
     
 
    0.992
cl9362_1
LOC100283525 (281 aa)
     
        0.983
Zm.85808
Hypothetical protein LOC100276978 (189 aa)
     
        0.980
GRMZM5G883149_P04
Hypothetical protein LOC100274110 (176 aa)
     
  0.978
copz1
LOC542595 (176 aa)
     
  0.978
copz2
LOC541628 (182 aa)
     
  0.978
GRMZM2G054378_P01
Putative uncharacterized protein (939 aa)
     
  0.978
GRMZM2G149406_P01
Putative uncharacterized protein ; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non- clathrin-coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network (1217 aa)
     
  0.975
GRMZM2G142895_P01
Annotation not available (64 aa)
     
  0.975
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
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