• Version:
  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
rfz1 protein (Zea mays) - STRING interaction network
"rfz1" - Fasciclin-like arabinogalactan protein 8 in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rfz1Fasciclin-like arabinogalactan protein 8 (303 aa)    
Predicted Functional Partners:
gpm617
Endoglucanase (621 aa)
     
        0.933
TIDP3736
Chitinase-like protein 1; Endochitinase A2; Uncharacterized protein (328 aa)
     
   
  0.928
pco137326
Fasciclin-like arabinogalactan protein 7 (282 aa)
     
   
0.918
100279256
Endoglucanase 2; Belongs to the glycosyl hydrolase 9 (cellulase E) family (526 aa)
     
        0.909
CesA-1
Cellulose synthase1 ; Belongs to the glycosyltransferase 2 family. Plant cellulose synthase subfamily (1075 aa)
     
   
  0.884
pco137705
Glycoprotein membrane GPI-anchored (197 aa)
     
        0.881
CesA-9
Cellulose synthase-9 ; Belongs to the glycosyltransferase 2 family. Plant cellulose synthase subfamily (1079 aa)
     
   
  0.879
100502065
annotation not available (185 aa)
     
        0.874
100286200
Fiber protein Fb34 (182 aa)
     
        0.874
GRMZM2G147849_P01
Endoglucanase; Endo-1,4-beta-glucanase Cel1 (621 aa)
     
        0.870
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Z. mays, Zea mays, Zea mays L., Zea mays var. japonica, maize
Server load: low (9%) [HD]