STRINGSTRING
umc1949 protein (Zea mays) - STRING interaction network
"umc1949" - Hypothetical protein LOC100191300 in Zea mays
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
umc1949Hypothetical protein LOC100191300 (322 aa)    
Predicted Functional Partners:
GRMZM2G146885_P01
Hypothetical protein LOC100192936 (288 aa)
       
      0.892
vdac1a
Voltage-dependent anion channel protein 1a (276 aa)
     
        0.752
bzip105
Hypothetical protein LOC100217305 (335 aa)
           
  0.721
GRMZM2G152888_P01
Serine palmitoyltransferase 2 (488 aa)
           
  0.710
pco130312
LOC100285632 (488 aa)
           
  0.710
Zm.23877
Putative uncharacterized proteinSerine palmitoyltransferase 2 ; (489 aa)
           
  0.710
GRMZM2G174757_P01
Hypothetical protein LOC100216593 ; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome (720 aa)
     
        0.688
umc1280
Hypothetical protein LOC100382039 (785 aa)
     
        0.599
GRMZM2G130544_P02
Hypothetical protein LOC100273341 (152 aa)
     
        0.590
Zm.163370
Phytosulfokines 4 (98 aa)
           
  0.564
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
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