STRINGSTRING
GRMZM2G085411_P01 protein (Zea mays) - STRING interaction network
"GRMZM2G085411_P01" - ligA in Zea mays
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GRMZM2G085411_P01ligA (596 aa)    
Predicted Functional Partners:
Zm.25284
Putative hect E3 ubiquitin ligase Fragment (1759 aa)
           
  0.546
Zm.26063
E3 ubiquitin-protein ligase UPL4 (1210 aa)
           
  0.546
GRMZM2G124297_P01
E3 ubiquitin-protein ligase UPL4-like (998 aa)
           
  0.546
Zm.84476
E3 ubiquitin-protein ligase UPL3-like (1877 aa)
           
  0.546
Zm.86002
Lectin-like receptor kinase 7 (690 aa)
       
 
  0.532
GRMZM2G176301_P01
C-4 methylsterol oxidase (265 aa)
       
 
  0.532
gpm532
LOC100282314 (301 aa)
       
 
  0.532
gpm829
LOC100285879 (293 aa)
       
 
  0.532
GRMZM2G172596_P01
GAST1 protein (129 aa)
           
  0.530
pco124475
GAST1 protein (114 aa)
           
  0.530
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
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