STRINGSTRING
Zm.2249 protein (Zea mays) - STRING interaction network
"Zm.2249" - LOC100283679 in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Zm.2249LOC100283679 (386 aa)    
Predicted Functional Partners:
RBR3
Retinoblastoma-related protein 3 (ZmRBR3); Regulator of biological processes that recruits a histone deacetylase to control gene transcription. May play a role in the entry into mitosis, negatively regulating the cell proliferation. Formation of stable complexes with geminiviridae replication-associated proteins may create a cellular environment which favors viral DNA replication (By similarity) (1010 aa)
     
  0.990
GRMZM2G016997_P01
Hypothetical protein LOC100217179 (1002 aa)
     
  0.990
e2f11
Hypothetical protein LOC100192057 (446 aa)
     
  0.986
e2f16
Hypothetical protein LOC100279729 (462 aa)
     
  0.986
e2f4
Uncharacterized protein (479 aa)
     
  0.986
e2f14
Transcription factor E2FB-like (548 aa)
     
  0.984
e2f2
Uncharacterized protein (265 aa)
     
  0.984
E2F5
E2F-related protein (468 aa)
     
  0.984
e2f17
Uncharacterized protein (346 aa)
     
  0.984
GRMZM5G836028_P01
Hypothetical protein LOC100217179 (505 aa)
     
  0.980
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
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