STRINGSTRING
umc1542 protein (Zea mays) - STRING interaction network
"umc1542" - Hypothetical protein LOC100384122 in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
umc1542Hypothetical protein LOC100384122 (492 aa)    
Predicted Functional Partners:
GRMZM5G829145_P01
Uncharacterized LOC103631485 (168 aa)
           
  0.412
GRMZM2G568912_P02
Uncharacterized protein (529 aa)
           
  0.412
pco074808b
Hypothetical protein LOC100273259 (280 aa)
           
  0.412
pco061803
LOC100283872 (282 aa)
           
  0.412
GRMZM2G151992_P01
Catalytic/ hydrolase (280 aa)
           
  0.412
GRMZM2G137543_P01
Annotation not available (105 aa)
           
  0.412
PCO136133
LOC100284091 (264 aa)
           
  0.412
GRMZM2G033787_P01
Hypothetical protein LOC100217049 (271 aa)
           
  0.412
AC191575.2_FGP001
Hypothetical protein LOC100193647 (280 aa)
           
  0.412
EREB185
Ethylene-responsive transcription factor ERF023-like (252 aa)
           
  0.410
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
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