STRINGSTRING
ypt1 protein (Zea mays) - STRING interaction network
"ypt1" - GTP-binding protein YPTM1 in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ypt1GTP-binding protein YPTM1 (316 aa)    
Predicted Functional Partners:
YPTM2
GTP-binding protein YPTM2 ; Protein transport. Probably involved in vesicular traffic (By similarity) (203 aa)
           
  0.720
Zm.442
Myosin1 (1529 aa)
           
  0.711
GRMZM2G036629_P01
Metallothionein-like protein 1 (79 aa)
           
  0.710
Zm.7330
Kinesin-1 (754 aa)
           
  0.529
GRMZM2G497438_P01
Uncharacterized LOC103646400 (424 aa)
           
  0.469
Zm.124713
22.0 kDa class IV heat shock protein (208 aa)
           
  0.469
Orphan88
Hypothetical protein LOC100217235 (244 aa)
           
  0.469
GRMZM2G152141_P01
Hypothetical protein LOC100279428 (182 aa)
           
  0.469
Zm.41153
Uncharacterized protein (339 aa)
           
  0.469
GRMZM2G072984_P01
Annotation not available (108 aa)
           
  0.469
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
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