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STRINGSTRING
100193546 protein (Zea mays) - STRING interaction network
"100193546" - Pentatricopeptide repeat-containing protein in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
100193546Pentatricopeptide repeat-containing protein (473 aa)    
Predicted Functional Partners:
GRMZM2G024838_P01
Structural constituent of ribosome (196 aa)
           
  0.739
103630399
Putative MYB DNA-binding domain superfamily protein (185 aa)
           
  0.730
GRMZM2G015067_P01
SURF1-like protein; Probably involved in the biogenesis of the COX complex (344 aa)
     
   
  0.712
542034
MADS-box transcription factor 47; Uncharacterized protein (235 aa)
           
  0.568
lon1
Lon protease homolog 2, peroxisomal; ATP-dependent serine protease that mediates the selective degradation of misfolded and unassembled polypeptides in the peroxisomal matrix. Necessary for type 2 peroxisome targeting signal (PTS2)-containing protein processing and facilitates peroxisome matrix protein import (885 aa)
     
   
  0.564
ereb167
Ethylene-responsive transcription factor RAP2-2 (357 aa)
           
  0.485
GRMZM5G862955_P02
Cytochrome c oxidase subunit 2; Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. Subunit 2 transfers the electrons from cytochrome c via its binuclear copper A center to the bimetallic center of the catalytic subunit 1 (457 aa)
           
  0.482
cox2
Cytochrome c oxidase subunit 2; Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. Subunit 2 transfers the electrons from cytochrome c via its binuclear copper A center to the bimetallic center of the catalytic subunit 1 (457 aa)
           
  0.482
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Z. mays, Zea mays, Zea mays L., Zea mays var. japonica, maize
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