STRINGSTRING
Zm.85259 protein (Zea mays) - STRING interaction network
"Zm.85259" - Hypothetical protein LOC100277402 in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Zm.85259Hypothetical protein LOC100277402 (529 aa)    
Predicted Functional Partners:
GRMZM2G011383_P01
Hypothetical protein LOC100273320 (343 aa)
           
  0.548
cop2
Coatomer protein2 (287 aa)
           
  0.528
GRMZM2G369803_P01
Inactive tetrahydrocannabinolic acid synthase-like (543 aa)
           
  0.455
GRMZM2G173105_P01
Putative FAD-binding Berberine family protein (543 aa)
           
  0.455
Zm.32945
Uncharacterized protein (279 aa)
           
  0.416
GRMZM2G544990_P01
Xylose isomerase (561 aa)
           
  0.410
GRMZM2G405575_P01
Uncharacterized protein (266 aa)
           
  0.410
GRMZM2G349649_P01
Coatomer subunit epsilon-2-like (196 aa)
           
  0.410
GRMZM2G313536_P01
Xylose isomerase (504 aa)
           
  0.410
Zm.31371
Hypothetical protein LOC100194321 (294 aa)
           
  0.410
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
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