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Zm.94763 protein (Zea mays) - STRING interaction network
"Zm.94763" - 22kD alpha zein5 in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Zm.9476322kD alpha zein5 (266 aa)    
Predicted Functional Partners:
Orphan301
Hypothetical protein LOC100279586 (397 aa)
           
  0.721
GRMZM2G102421_P01
NEDD8-conjugating enzyme Ubc12-like (183 aa)
           
  0.720
csu1185
LOC100283043 (130 aa)
           
  0.621
GRMZM2G063617_P01
Hypothetical protein LOC100192778 (130 aa)
           
  0.621
Zm.93666
LOC100283364 (130 aa)
           
  0.621
cl16981_1
LOC100284075 (272 aa)
           
  0.589
GRMZM2G138881_P01
ER lumen protein retaining receptor C28H8.4 (273 aa)
           
  0.589
GRMZM2G057852_P01
Histone H2B.3 ; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling (152 aa)
           
  0.569
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
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