STRINGSTRING
sbe1 protein (Zea mays) - STRING interaction network
"sbe1" - Starch branching enzyme1 in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sbe1Starch branching enzyme1 (823 aa)    
Predicted Functional Partners:
gpm274
LOC100285259 ; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties (838 aa)
 
  0.999
Zm.13152
Phosphorylase (EC 2.4.1.1); Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties (984 aa)
 
  0.995
Zm.7069
Plastid starch synthase I precursor (640 aa)
   
 
  0.985
Zm.62296
Starch synthase IIb-2 precursor (706 aa)
   
 
  0.981
Zm.5458
Starch synthase IIc precursor (774 aa)
   
 
  0.979
Zm.54
Alpha-amylase (439 aa)
   
 
  0.978
GRMZM2G103055_P01
Alpha-amylase (480 aa)
   
 
  0.978
GRMZM2G070172_P01
Hypothetical protein LOC100383492 (441 aa)
   
 
  0.978
gpm120
Hypothetical protein LOC100273593 (424 aa)
   
 
  0.974
Zpu1
Pullulanase-type starch debranching enzyme1 (962 aa)
   
 
  0.937
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
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