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cl190_1 protein (Zea mays) - STRING interaction network
"cl190_1" - RNA polymerase II transcriptional coactivator KIWI in Zea mays
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cl190_1RNA polymerase II transcriptional coactivator KIWI (106 aa)    
Predicted Functional Partners:
100286213
Sm-like protein LSM5; SAD1; SAD1 isoform 1; SAD1 isoform 2; Uncharacterized protein (137 aa)
     
        0.838
100283319
SAD1; SAD1 isoform 1; SAD1 isoform 2; Uncharacterized protein (88 aa)
     
        0.838
100384655
RNA polymerase II transcriptional coactivator KELP (209 aa)
       
 
  0.833
100282336
Small nuclear ribonucleoprotein G; Uncharacterized protein (80 aa)
     
        0.832
100193784
Small nuclear ribonucleoprotein G; Uncharacterized protein (80 aa)
     
        0.832
CoAp15.3
RNA polymerase II transcriptional coactivator KELP (140 aa)
       
 
0.706
IDP825
DNA-directed RNA polymerases II IV and V subunit 3; DNA-directed RNA polymerase II 36 kDa polypeptide A; Uncharacterized protein (328 aa)
     
 
  0.701
100284208
Transcription elongation factor SPT4 homolog; May regulate transcription elongation by RNA polymerase II. May enhance transcriptional pausing at sites proximal to the promoter, which may in turn facilitate the assembly of an elongation competent RNA polymerase II complex (129 aa)
     
 
  0.686
103635834
Protein RNA-directed DNA methylation 3 (1564 aa)
       
 
  0.682
GRMZM2G370715_P01
Protein RNA-directed DNA methylation 3 (1499 aa)
       
 
  0.682
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Z. mays, Zea mays, Zea mays L., Zea mays var. japonica, maize
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