• Version:
  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
GRMZM2G090241_P01 protein (Zea mays) - STRING interaction network
"GRMZM2G090241_P01" - 4-hydroxy-tetrahydrodipicolinate reductase 2 chloroplastic in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GRMZM2G090241_P014-hydroxy-tetrahydrodipicolinate reductase 2 chloroplastic; Dihydrodipicolinate reductase; Uncharacterized protein (343 aa)    
Predicted Functional Partners:
100282239
Dihydrodipicolinate synthase 2; Uncharacterized protein (377 aa)
     
 
  0.964
dps1
4-hydroxy-tetrahydrodipicolinate synthase, chloroplastic; Catalyzes the condensation of (S)-aspartate-beta- semialdehyde [(S)-ASA] and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA); Belongs to the DapA family (380 aa)
     
 
  0.964
GRMZM2G415117_P01
Putative pyridoxal phosphate (PLP)-dependent transferase family protein (447 aa)
     
 
  0.947
GRMZM2G010328_P01
LL-diaminopimelate aminotransferase chloroplastic; Transaminase/transferase; Uncharacterized protein (462 aa)
     
 
  0.947
103632470
annotation not available (458 aa)
     
 
  0.916
100192991
Eukaryotic translation initiation factor 5A-1/2; Uncharacterized protein (160 aa)
     
        0.838
GRMZM2G131998_P01
tRNA (guanine-N(7)-)-methyltransferase non-catalytic subunit; Required for the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA. In the complex, it is required to stabilize and induce conformational changes of the catalytic subunit; Belongs to the WD repeat TRM82 family (434 aa)
     
        0.830
100272879
4-hydroxy-tetrahydrodipicolinate reductase 2 chloroplastic (329 aa)
   
   
0.810
rca1
Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic; Activation of RuBisCO (ribulose-1,5-bisphosphate carboxylase/oxygenase; EC 4.1.1.39) involves the ATP-dependent carboxylation of the epsilon-amino group of lysine leading to a carbamate structure (433 aa)
           
  0.798
GRMZM2G395728_P02
annotation not available (370 aa)
           
  0.761
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Z. mays, Zea mays, Zea mays L., Zea mays var. japonica, maize
Server load: low (8%) [HD]