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mta1 protein (Zea mays) - STRING interaction network
"mta1" - 60S ribosomal protein L13a-1 in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mta160S ribosomal protein L13a-1 (206 aa)    
Predicted Functional Partners:
GRMZM2G074300_P02
Uncharacterized protein (265 aa)
   
 
  0.999
100280746
60S ribosomal protein L7a; Uncharacterized protein (258 aa)
   
 
  0.999
pco137857
Uncharacterized protein (187 aa)
 
 
  0.999
GRMZM2G066222_P01
40S ribosomal protein S27 (86 aa)
     
 
  0.999
TIDP2739
40S ribosomal protein S3; Uncharacterized protein ; Belongs to the universal ribosomal protein uS3 family (229 aa)
   
 
  0.998
100282819
60S acidic ribosomal protein P1; 60S acidic ribosomal protein P1 isoform 1; 60S acidic ribosomal protein P1 isoform 2; 60S acidic ribosomal protein P1 isoform 3; Uncharacterized protein ; Belongs to the eukaryotic ribosomal protein P1/P2 family (109 aa)
     
 
  0.998
arpp1a
60S acidic ribosomal protein P1; Plays an important role in the elongation step of protein synthesis; Belongs to the eukaryotic ribosomal protein P1/P2 family (109 aa)
     
 
  0.998
GRMZM2G305154_P01
40S ribosomal protein S29; Uncharacterized protein (56 aa)
   
 
  0.998
GRMZM2G044848_P01
Mediator of RNA polymerase II transcription subunit 36a (217 aa)
   
 
  0.998
GRMZM2G086906_P01
40S ribosomal protein S17-4 (142 aa)
     
 
  0.998
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Z. mays, Zea mays, Zea mays L., Zea mays var. japonica, maize
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