STRINGSTRING
Zm.85454 protein (Zea mays) - STRING interaction network
"Zm.85454" - Hypothetical protein LOC100276335 in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Zm.85454Hypothetical protein LOC100276335 (465 aa)    
Predicted Functional Partners:
GRMZM2G314934_P01
Uncharacterized protein (358 aa)
           
  0.546
GRMZM2G015805_P01
Uncharacterized protein (341 aa)
           
  0.546
umc1317
Uncharacterized LOC100272276 (271 aa)
           
  0.459
AC216010.3_FGP001
Pseudouridylate synthase (EC 5.4.99.-) (443 aa)
           
  0.459
Zm.81456
40S ribosomal protein S24 (137 aa)
           
  0.454
GRMZM2G171426_P01
40S ribosomal protein S24 (137 aa)
           
  0.453
rps24
Ribosomal protein S24 (137 aa)
           
  0.453
GRMZM2G174107_P01
Triose phosphate/phosphate translocator, non-green plastid,chloroplast (395 aa)
           
  0.418
Zm.142883
Uncharacterized LOC103630692 (890 aa)
           
  0.416
Zm.10246
Uncharacterized protein (1748 aa)
           
  0.416
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
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