STRINGSTRING
betl-10 protein (Zea mays) - STRING interaction network
"betl-10" - Putative defensin in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
betl-10Putative defensin (84 aa)    
Predicted Functional Partners:
esr6
Defensin (107 aa)
           
  0.720
BET1
Basal endosperm transfer layer1c (85 aa)
           
  0.710
pgd3
6-phosphogluconate dehydrogenase, decarboxylating (EC 1.1.1.44); Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH (507 aa)
           
  0.570
bap2
Hypothetical protein LOC100193396 (95 aa)
           
  0.569
al-9
5a2 proteinAL-9 proteinPutative uncharacterized protein ;; (111 aa)
           
  0.529
DEK1
Defective kernel1 ; Essential protein involved in epiderm development. Required for aleurone cell development in the endosperm probably by maintaining and restricting the aleurone and embryonic epidermal L1 cell-layer fates as well as meristems organization. Involved in the maintenance of adaxial/abaxial axis information in developing leaves, probably by regulating cell proliferation and expansion. Does not need calcium ions to be active (2159 aa)
           
  0.520
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
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